标题:Elevated mRNA Levels of AURKA, CDC20 and TPX2 are associated with poor prognosis of smoking related lung adenocarcinoma using bioinformatics analysis
作者:Zhang, Meng-Yu; Liu, Xiao-Xia; Li, Hao; Li, Rui; Liu, Xiao; Qu, Yi-Qing
作者机构:[Zhang, Meng-Yu; Liu, Xiao-Xia; Li, Hao; Li, Rui; Liu, Xiao; Qu, Yi-Qing] Shandong Univ, Qilu Hosp, Dept Resp Med, Wenhuaxi Rd 107, Jinan 250012, Shan 更多
通讯作者:Qu, YQ
通讯作者地址:[Qu, YQ]Shandong Univ, Qilu Hosp, Dept Resp Med, Wenhuaxi Rd 107, Jinan 250012, Shandong, Peoples R China.
来源:INTERNATIONAL JOURNAL OF MEDICAL SCIENCES
出版年:2018
卷:15
期:14
页码:1676-1685
DOI:10.7150/ijms.28728
关键词:lung adenocarcinoma; differentially expressed genes; gene ontology;; Kaplan-Meier analysis; biomarkers
摘要:Background and aim: Adenocarcinoma is a very common pathological subtype for lung cancer. We aimed to identify the gene signature associated with the prognosis of smoking related lung adenocarcinoma using bioinformatics analysis.; Methods: A total of five gene expression profiles (GSE31210, GSE32863, GSE40791, GSE43458 and GSE75037) have been identified from the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) were analyzed using GEO2R software and functional and pathway enrichment analysis. Furthermore, the overall survival (OS) and recurrence-free survival (RFS) have been validated using an independent cohort from the Cancer Genome Atlas (TCGA) database.; Results: We identified a total of 58 DEGs which mainly enriched in ECM-receptor interaction, platelet activation and PPAR signaling pathway. Then according to the enrichment analysis results, we selected three genes (AURKA, CDC20 and TPX2) for their roles in regulating tumor cell cycle and cell division. The results showed that the hazard ratio (HR) of the mRNA expression of AURKA for OS was 1.588 with (1.127-2.237) 95% confidence interval (CI) (P=0.009). The mRNA levels of CDC20 (HR 1.530, 95% CI 1.086-2.115, P=0.016) and TPX2 (HR 1.777, 95% CI 1.262-2.503, P=0.001) were also significantly associated with the OS. Expression of these three genes were not associated with RFS, suggesting that there might be many factors affect RFS.; Conclusion: The mRNA signature of AURKA, CDC20 and TPX2 were potential biomarkers for predicting poor prognosis of smoking related lung adenocarcinoma.
收录类别:SCIE
资源类型:期刊论文
TOP