标题:Complete genome sequence of Bradymonas sediminis FA350(T), the first representative of the order Bradymonadales
作者:Wang, Shuo; Mu, Da-Shuai; Zheng, Wei-Shuang; Du, Zong-Jun
作者机构:[Wang, Shuo; Mu, Da-Shuai; Zheng, Wei-Shuang; Du, Zong-Jun] Shandong Univ, Coll Marine Sci, Weihai 264209, Peoples R China.; [Du, Zong-Jun] Shandong 更多
通讯作者:Du, ZJ
通讯作者地址:[Du, ZJ]Shandong Univ, Coll Marine Sci, Weihai 264209, Peoples R China.
来源:MARINE GENOMICS
出版年:2019
卷:46
页码:62-65
DOI:10.1016/j.margen.2019.01.002
关键词:Bradymonas sediminis FA350(T); Bradymonadales; Bradymonadaceae;; Bacterial predator; Complete genome sequence
摘要:Bradymonas sediminis FA350(T) (= DSM 28820(T) = CICC 10904(T)) is a Gram-negative, rod-shaped and facultatively anaerobic bacterium isolated from coastal sediments from the Xiaoshi Island, Weihai, China. Phylogenetic analysis based on 16S rRNA gene sequences revealed that that strain FA350(T) belonged to a novel bacterial order in the class Deltaproteobacteria. Then, based on polyphasic taxonomy analyses, a novel order Bradymonadales and a novel family Bradymonadaceae were proposed and validly published. Here, we reported the complete genome of this strain; the genome is 5,045,683 bp in size, has a GC content of 61.1% and contains 3992 predicted genes. Strain FA350(T) featured being able to prey on bacteria like the members from the order Myxococcales. This is in concordance with the fact that strain FA350(T) encoded genes affiliated with ABC-transporter, type IV pilus, type II secretion system, toxins and chemotaxis, which are known to play critical roles in bacterial predation. This genome data will provide insights into the bacterial predation pattern of strain FA350(T) and facilitate the investigation of the mutual interaction between predators and prey.; Nucleotide sequence accession number: The complete genome sequence of B. sediminis FA350(T) is available in the NCBI database (accession number CP030032). The strain has been deposited in the Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Culture and China Centre of Industrial Culture Collection (=DSM 28820(T) = CICC 10904(T)).
收录类别:SCOPUS;SCIE
资源类型:期刊论文
原文链接:https://www.scopus.com/inward/record.uri?eid=2-s2.0-85060109042&doi=10.1016%2fj.margen.2019.01.002&partnerID=40&md5=42596b0e3282104cd48c4ac1be7bb4e2
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